Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | SLIN_RS28035 | Not Available | + | 6947840 - 6948322 | 18446.2 |
| duf6265 family protein | SLIN_RS28040 | Not Available | + | 6948418 - 6948897 | 18260.1 |
| s41 family peptidase | SLIN_RS28045 | Q9RDE2 | - | 6949021 - 6952314 | 119860.0 |
| crp/fnr family transcriptional regulator | SLIN_RS28050 | Not Available | + | 6952493 - 6953077 | 22968.8 |
| hypothetical protein | SLIN_RS28055 | Not Available | + | 6953165 - 6953791 | 22047.3 |
| duf4386 domain-containing protein | SLIN_RS28060 | Not Available | + | 6953823 - 6954578 | 27729.4 |
| nad-dependent epimerase/dehydratase family protein | SLIN_RS28065 | Not Available | + | 6954599 - 6955513 | 33469.8 |
| voc family protein | SLIN_RS28070 | P54721 | + | 6955618 - 6956103 | 17980.3 |
| family 16 glycoside hydrolase | SLIN_RS28075 | Not Available | - | 6956467 - 6957300 | 30905.0 |
| smp-30/gluconolactonase/lre family protein | SLIN_RS28080 | Not Available | + | 6957694 - 6958800 | 39862.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)