Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | SLIN_RS27885 | Not Available | + | 6917671 - 6918270 | 23156.9 |
| hypothetical protein | SLIN_RS27890 | Not Available | + | 6918239 - 6919162 | 33635.1 |
| outer membrane beta-barrel protein | SLIN_RS27895 | Not Available | + | 6919159 - 6920184 | 38241.9 |
| nad(p)h-binding protein | SLIN_RS27900 | Not Available | + | 6920188 - 6921018 | 29993.9 |
| glycosyltransferase family protein | SLIN_RS27905 | Not Available | - | 6921007 - 6922155 | 42932.9 |
| udp-2,3-diacylglucosamine diphosphatase | SLIN_RS27910 | Not Available | - | 6922166 - 6922993 | 31655.6 |
| acetyltransferase | SLIN_RS27915 | Not Available | + | 6923107 - 6923739 | 22029.7 |
| gdp-l-fucose synthase | SLIN_RS27920 | O49213 | - | 6923872 - 6924813 | 35319.1 |
| hypothetical protein | SLIN_RS27925 | Not Available | + | 6925123 - 6925944 | 32035.2 |
| tetratricopeptide repeat protein | SLIN_RS27930 | Not Available | - | 6925965 - 6926774 | 29953.5 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)