Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell wall metabolism sensor histidine kinase walk | SLIN_RS27535 | P23545 | - | 6827258 - 6828292 | 39040.0 |
| response regulator transcription factor | SLIN_RS27540 | P37478 | - | 6828388 - 6829095 | 27032.7 |
| ai-2e family transporter | SLIN_RS27545 | O34472 | + | 6829394 - 6830545 | 42578.5 |
| lon peptidase substrate-binding domain-containing protein | SLIN_RS27550 | Not Available | - | 6830640 - 6831269 | 24011.9 |
| nicotinamidase | SLIN_RS27555 | Not Available | - | 6831292 - 6832077 | 29311.9 |
| hypothetical protein | SLIN_RS27560 | Not Available | + | 6832296 - 6833651 | 51309.5 |
| 50s ribosomal protein l11 methyltransferase | SLIN_RS27565 | A6L2N4 | + | 6833720 - 6834550 | 30852.0 |
| hypothetical protein | SLIN_RS27570 | Not Available | + | 6834617 - 6839662 | 184726.0 |
| cpbp family intramembrane glutamic endopeptidase | SLIN_RS27575 | Not Available | + | 6839773 - 6840699 | 35835.5 |
| gmc oxidoreductase | SLIN_RS27580 | Not Available | + | 6840779 - 6842518 | 65647.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)