Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | SLIN_RS27485 | P37726 | - | 6814793 - 6816406 | 58824.9 |
| atp-dependent helicase | SLIN_RS27490 | P56255 | - | 6816476 - 6818770 | 86100.7 |
| hypothetical protein | SLIN_RS27495 | Not Available | - | 6818851 - 6819291 | 16492.6 |
| rna polymerase sigma factor | SLIN_RS27500 | Not Available | + | 6819453 - 6820040 | 22743.8 |
| hypothetical protein | SLIN_RS27505 | Not Available | + | 6820123 - 6820755 | 24342.0 |
| duf4097 family beta strand repeat-containing protein | SLIN_RS27510 | Not Available | + | 6820739 - 6821794 | 38776.9 |
| fused mfs/spermidine synthase | SLIN_RS27515 | Not Available | + | 6821990 - 6824266 | 83450.5 |
| cupin domain-containing protein | SLIN_RS27520 | Not Available | - | 6824337 - 6824831 | 17994.2 |
| triose-phosphate isomerase | SLIN_RS27525 | Q11PZ7 | - | 6824968 - 6825732 | 27406.5 |
| aspartyl protease family protein | SLIN_RS27530 | Not Available | + | 6825969 - 6827234 | 47012.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)