Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | SLIN_RS27435 | Q3ABL2 | + | 6805463 - 6806728 | 48075.2 |
| pirin family protein | SLIN_RS27440 | Q9I163 | - | 6806812 - 6807672 | 30723.4 |
| fpg/nei family dna glycosylase | SLIN_RS27445 | O80358 | - | 6807740 - 6808555 | 31225.7 |
| duf4199 family protein | SLIN_RS27450 | Not Available | - | 6808678 - 6809217 | 19899.4 |
| abc transporter permease | SLIN_RS27455 | Not Available | - | 6809223 - 6809999 | 29821.1 |
| abc transporter permease | SLIN_RS27460 | Not Available | - | 6809996 - 6810721 | 27616.7 |
| abc transporter atp-binding protein | SLIN_RS27465 | Q7N6Z2 | - | 6810721 - 6811419 | 26195.7 |
| hypothetical protein | SLIN_RS27470 | Not Available | + | 6812372 - 6813307 | 34480.1 |
| hypothetical protein | SLIN_RS27475 | Not Available | - | 6813376 - 6813813 | 15915.9 |
| transglutaminase family protein | SLIN_RS27480 | Not Available | - | 6813816 - 6814682 | 31852.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)