Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding dehydrogenase | SLIN_RS27280 | E5AE42 | + | 6768633 - 6769658 | 35990.5 |
| 8-amino-7-oxononanoate synthase | SLIN_RS27285 | C8V1D1 | + | 6769832 - 6771019 | 42846.1 |
| dethiobiotin synthase | SLIN_RS27290 | A0M7A5 | + | 6771016 - 6771648 | 22652.3 |
| aminotransferase class iv | SLIN_RS27295 | Not Available | - | 6771697 - 6772548 | 32004.6 |
| serine hydrolase | SLIN_RS27300 | Not Available | - | 6772688 - 6774769 | 74790.4 |
| aspartate kinase | SLIN_RS27305 | P08660 | - | 6775082 - 6776326 | 46298.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SLIN_RS27310 | Q11NY7 | - | 6776440 - 6778374 | 70949.1 |
| rhomboid family intramembrane serine protease | SLIN_RS27315 | Not Available | - | 6778624 - 6779550 | 34332.7 |
| rhomboid family intramembrane serine protease | SLIN_RS27320 | Not Available | - | 6779554 - 6780333 | 29549.8 |
| dna mismatch repair endonuclease mutl | SLIN_RS27325 | Q11Z58 | - | 6780369 - 6782426 | 75859.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)