Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf433 domain-containing protein | SLIN_RS27130 | Not Available | + | 6742697 - 6742891 | 6950.75 |
| duf5615 family pin-like protein | SLIN_RS27135 | Not Available | + | 6742888 - 6743238 | 13507.3 |
| imidazole glycerol phosphate synthase subunit hish | SLIN_RS27140 | Q64RT0 | + | 6743457 - 6744044 | 21742.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | SLIN_RS27145 | Q11VM2 | + | 6744166 - 6744888 | 26571.8 |
| hypothetical protein | SLIN_RS27150 | Not Available | + | 6744895 - 6745551 | 25375.5 |
| gnat family n-acetyltransferase | SLIN_RS27155 | I1RV22 | + | 6745566 - 6745985 | 15782.1 |
| imidazole glycerol phosphate synthase subunit hisf | SLIN_RS27160 | Q11VM1 | + | 6745985 - 6746740 | 26739.1 |
| outer membrane beta-barrel protein | SLIN_RS27165 | Not Available | - | 6746821 - 6747723 | 33552.9 |
| hypothetical protein | SLIN_RS27170 | Not Available | + | 6747763 - 6748752 | 37136.4 |
| abc transporter atp-binding protein | SLIN_RS27175 | Q9FNU2 | + | 6748843 - 6750648 | 66503.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)