Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | SLIN_RS27030 | Q8X715 | - | 6713597 - 6714316 | 26980.0 |
| hypothetical protein | SLIN_RS27035 | Not Available | + | 6714365 - 6714718 | 13365.1 |
| duf4175 family protein | SLIN_RS27040 | Not Available | + | 6714737 - 6718039 | 126565.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | SLIN_RS27045 | Q11PC8 | + | 6718194 - 6720056 | 69268.6 |
| methyltransferase domain-containing protein | SLIN_RS27050 | Not Available | + | 6720127 - 6721008 | 32858.3 |
| tetratricopeptide repeat protein | SLIN_RS27055 | Not Available | + | 6721496 - 6723319 | 68932.2 |
| threonine synthase | SLIN_RS27060 | P00934 | - | 6723406 - 6724713 | 47232.9 |
| l-glutamate gamma-semialdehyde dehydrogenase | SLIN_RS27065 | Q54RA2 | + | 6724854 - 6726485 | 59906.2 |
| 16s ribosomal rna | Not Available | Not Available | + | 6726830 - 6728346 | Not Available |
| Trna-ile | Not Available | Not Available | + | 6728385 - 6728461 | Not Available |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)