Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | SLIN_RS26980 | Not Available | - | 6701334 - 6702689 | 50324.0 |
| tetr/acrr family transcriptional regulator | SLIN_RS26985 | Not Available | - | 6702655 - 6703314 | 25690.9 |
| dna replication/repair protein recf | SLIN_RS26990 | A6H141 | - | 6703580 - 6704686 | 42953.1 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | SLIN_RS26995 | Q4UKQ6 | + | 6704875 - 6705933 | 39238.6 |
| ring-cleaving dioxygenase | SLIN_RS27000 | Not Available | + | 6706133 - 6707071 | 34976.3 |
| alpha/beta hydrolase | SLIN_RS27005 | Not Available | + | 6707156 - 6707806 | 23750.4 |
| muconolactone delta-isomerase family protein | SLIN_RS27010 | Not Available | + | 6707818 - 6708114 | 11493.1 |
| barstar family protein | SLIN_RS27015 | Not Available | + | 6708305 - 6708751 | 17248.3 |
| transcription-repair coupling factor | SLIN_RS27020 | P37474 | + | 6708853 - 6712206 | 127352.0 |
| gliding motility lipoprotein gldj | SLIN_RS27025 | Not Available | + | 6712246 - 6713508 | 46894.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)