Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | SLIN_RS26830 | A5FA70 | + | 6660789 - 6661775 | 35856.4 |
| indole-3-glycerol phosphate synthase trpc | SLIN_RS26835 | Q8AAD6 | + | 6661772 - 6662581 | 29685.5 |
| phosphoribosylanthranilate isomerase | SLIN_RS26840 | A6L9J9 | + | 6662593 - 6663237 | 24153.8 |
| duf6934 family protein | SLIN_RS26845 | Not Available | + | 6663399 - 6663728 | 12465.9 |
| tryptophan synthase subunit beta | SLIN_RS26850 | Q8AAD2 | + | 6663934 - 6665133 | 43231.6 |
| tryptophan synthase subunit alpha | SLIN_RS26855 | A5FA76 | + | 6665276 - 6666112 | 30415.2 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | SLIN_RS26860 | Q8A7Z7 | + | 6666129 - 6666737 | 22507.7 |
| phage holin family protein | SLIN_RS26865 | Q53868 | + | 6666836 - 6667171 | 11807.3 |
| rida family protein | SLIN_RS26870 | P37552 | + | 6667262 - 6667639 | 13477.1 |
| alpha-2-macroglobulin | SLIN_RS26875 | Not Available | - | 6667716 - 6674237 | 242430.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)