Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | SLIN_RS26680 | Not Available | - | 6619585 - 6620850 | 47226.5 |
| fg-gap-like repeat-containing protein | SLIN_RS26685 | Not Available | - | 6620936 - 6624547 | 132261.0 |
| oligosaccharide flippase family protein | SLIN_RS26690 | Not Available | - | 6624688 - 6626223 | 57316.5 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SLIN_RS26695 | Q8A155 | + | 6626385 - 6627932 | 56053.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SLIN_RS26700 | Q9US20 | + | 6628118 - 6628843 | 27802.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | SLIN_RS26705 | B6IN24 | + | 6628887 - 6629174 | 10717.6 |
| multidrug efflux smr transporter | SLIN_RS26710 | Not Available | - | 6629258 - 6629647 | 14720.6 |
| duf1501 domain-containing protein | SLIN_RS26715 | Not Available | - | 6629774 - 6631276 | 55055.7 |
| duf1553 domain-containing protein | SLIN_RS26720 | Not Available | - | 6631881 - 6634655 | 104659.0 |
| sialate o-acetylesterase | SLIN_RS26725 | Not Available | - | 6634795 - 6637173 | 83770.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)