Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS26625 | Not Available | + | 6605269 - 6605487 | 7882.63 |
| had family hydrolase | SLIN_RS26635 | Not Available | - | 6605928 - 6606629 | 26371.7 |
| duf4301 family protein | SLIN_RS26640 | Not Available | + | 6606780 - 6608297 | 56229.3 |
| rrf2 family transcriptional regulator | SLIN_RS26645 | Not Available | - | 6608374 - 6608859 | 17670.6 |
| ipt/tig domain-containing protein | SLIN_RS26650 | Not Available | - | 6609280 - 6610959 | 57406.3 |
| tonb-dependent receptor | SLIN_RS26655 | Not Available | - | 6611012 - 6613900 | 106698.0 |
| gaf domain-containing sensor histidine kinase | SLIN_RS26660 | Q87GU5 | - | 6614356 - 6615579 | 44918.7 |
| m14 family zinc carboxypeptidase | SLIN_RS26665 | Not Available | - | 6615982 - 6617454 | 55089.8 |
| fluoride efflux transporter crcb | SLIN_RS26670 | A4Y6Z6 | - | 6617430 - 6617807 | 12813.0 |
| amino acid permease | SLIN_RS26675 | Q59I64 | + | 6618041 - 6619345 | 46386.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)