Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS26525 | Not Available | - | 6582394 - 6583167 | 29808.5 |
| sdr family oxidoreductase | SLIN_RS26530 | Q4WKX1 | - | 6583338 - 6584075 | 26350.1 |
| arac family transcriptional regulator | SLIN_RS26535 | Not Available | - | 6584142 - 6585032 | 34635.3 |
| glucosamine-6-phosphate deaminase | SLIN_RS26540 | Q8AB53 | - | 6585125 - 6587098 | 73500.5 |
| gfo/idh/moca family protein | SLIN_RS26545 | Q92KZ3 | - | 6587233 - 6588390 | 43643.3 |
| rna polymerase sigma factor | SLIN_RS26550 | Not Available | + | 6588714 - 6589292 | 23009.6 |
| fecr domain-containing protein | SLIN_RS26555 | Not Available | + | 6589797 - 6590447 | 24007.5 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS26560 | Not Available | + | 6590529 - 6593804 | 119441.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS26565 | Not Available | + | 6593820 - 6595547 | 64651.9 |
| outer membrane beta-barrel protein | SLIN_RS26570 | Not Available | - | 6595661 - 6596227 | 21272.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)