Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | SLIN_RS25625 | O31178 | + | 6381022 - 6381330 | 11728.4 |
| holliday junction branch migration dna helicase ruvb | SLIN_RS25630 | Q11Y53 | - | 6381419 - 6382447 | 37611.2 |
| t9ss c-terminal target domain-containing protein | SLIN_RS25635 | Not Available | - | 6382546 - 6386169 | 129671.0 |
| type ix secretion system membrane protein porp/sprf | SLIN_RS25640 | Not Available | + | 6386447 - 6387478 | 38354.5 |
| type ii toxin-antitoxin system higa family antitoxin | SLIN_RS25645 | Not Available | - | 6387653 - 6388006 | 13218.8 |
| energy-dependent translational throttle protein etta | SLIN_RS25650 | P0A9W4 | - | 6388309 - 6389976 | 62360.4 |
| duf349 domain-containing protein | SLIN_RS25655 | Not Available | + | 6390051 - 6391328 | 49665.7 |
| hypothetical protein | SLIN_RS25660 | Not Available | + | 6391486 - 6391761 | 9930.78 |
| nudix domain-containing protein | SLIN_RS25665 | Not Available | + | 6391798 - 6392250 | 16963.3 |
| dinb family protein | SLIN_RS25670 | Not Available | + | 6392302 - 6392754 | 17273.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)