Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| had family phosphatase | SLIN_RS00670 | Q9ZVJ5 | + | 160708 - 161385 | 25072.0 |
| hypothetical protein | SLIN_RS00675 | Not Available | + | 162061 - 164514 | 85875.2 |
| transglutaminase-like domain-containing protein | SLIN_RS00680 | Not Available | + | 167068 - 168030 | 35686.7 |
| pas domain s-box protein | SLIN_RS00685 | Not Available | + | 168515 - 171676 | 118359.0 |
| fist signal transduction protein | SLIN_RS00690 | Not Available | + | 171845 - 172984 | 40861.6 |
| response regulator | SLIN_RS00695 | Q54YZ9 | + | 173354 - 175324 | 73198.7 |
| pas domain s-box protein | SLIN_RS00700 | P30855 | + | 175822 - 179358 | 130646.0 |
| opgc domain-containing protein | SLIN_RS00705 | Not Available | - | 179339 - 180526 | 45648.7 |
| family 16 glycosylhydrolase | SLIN_RS00710 | Not Available | - | 181093 - 181890 | 29407.3 |
| hypothetical protein | SLIN_RS00720 | Not Available | + | 183833 - 184204 | 14052.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)