Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | SLIN_RS25375 | P77735 | - | 6322876 - 6323850 | 35727.0 |
| taud/tfda family dioxygenase | SLIN_RS25380 | Not Available | - | 6324002 - 6324790 | 29773.2 |
| glycosyltransferase family 2 protein | SLIN_RS25385 | P9WLV4 | - | 6324867 - 6325835 | 37284.6 |
| hypothetical protein | SLIN_RS25390 | Not Available | - | 6325906 - 6326730 | 31306.8 |
| hypothetical protein | SLIN_RS25395 | Not Available | - | 6326843 - 6327790 | 36326.5 |
| nad-dependent epimerase/dehydratase family protein | SLIN_RS25400 | Not Available | - | 6327915 - 6328988 | 40469.6 |
| hypothetical protein | SLIN_RS25405 | Not Available | - | 6329209 - 6329487 | 10160.0 |
| m3 family oligoendopeptidase | SLIN_RS25410 | Not Available | - | 6329562 - 6331304 | 67513.9 |
| blai/meci/copy family transcriptional regulator | SLIN_RS25415 | Not Available | + | 6331505 - 6331870 | 13909.5 |
| m56 family metallopeptidase | SLIN_RS25420 | Not Available | + | 6331901 - 6333985 | 78350.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)