Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1c | SLIN_RS24865 | P76577 | + | 6202412 - 6204844 | 89784.9 |
| nuclear transport factor 2 family protein | SLIN_RS24870 | Not Available | + | 6204913 - 6205353 | 15573.5 |
| mg2 domain-containing protein | SLIN_RS24875 | Q9CMZ1 | + | 6205460 - 6211021 | 202346.0 |
| hypothetical protein | SLIN_RS24880 | Not Available | + | 6211150 - 6212472 | 52765.1 |
| gamma carbonic anhydrase family protein | SLIN_RS24885 | Q9FWR5 | + | 6212639 - 6213151 | 18222.9 |
| hupe/urej family protein | SLIN_RS24890 | Not Available | + | 6213154 - 6213768 | 22819.7 |
| m1 family metallopeptidase | SLIN_RS24895 | Not Available | + | 6213907 - 6216285 | 89118.0 |
| m1 family metallopeptidase | SLIN_RS24900 | Not Available | + | 6216310 - 6218715 | 90435.3 |
| Trna-pro | Not Available | Not Available | + | 6218820 - 6218896 | Not Available |
| smp-30/gluconolactonase/lre family protein | SLIN_RS24910 | Not Available | - | 6219014 - 6219964 | 34011.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)