Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vcbs repeat-containing protein | SLIN_RS24765 | Not Available | - | 6160179 - 6163520 | 123315.0 |
| vcbs repeat-containing protein | SLIN_RS24770 | Not Available | - | 6163737 - 6167237 | 128315.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS24775 | Not Available | - | 6167443 - 6168924 | 55628.6 |
| tonb-dependent receptor | SLIN_RS24780 | Not Available | - | 6169053 - 6172196 | 112896.0 |
| vcbs repeat-containing protein | SLIN_RS24785 | Not Available | - | 6173047 - 6176532 | 128815.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS24790 | Not Available | - | 6176806 - 6178395 | 57632.4 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS24795 | Not Available | - | 6178484 - 6181597 | 110324.0 |
| fad-binding and (fe-s)-binding domain-containing protein | SLIN_RS24800 | P77748 | + | 6182488 - 6185517 | 112476.0 |
| geved domain-containing protein | SLIN_RS24805 | Not Available | + | 6185696 - 6188257 | 90293.2 |
| apc family permease | SLIN_RS24810 | Q91WN3 | - | 6188357 - 6189730 | 49704.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)