Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | SLIN_RS24460 | Q11PM4 | + | 6080362 - 6081099 | 27219.3 |
| trna 2-selenouridine(34) synthase mnmh | SLIN_RS24465 | Q889F6 | + | 6081331 - 6082359 | 37866.4 |
| hypothetical protein | SLIN_RS24470 | Not Available | - | 6082388 - 6082981 | 22333.1 |
| duf2442 domain-containing protein | SLIN_RS24475 | Not Available | - | 6083003 - 6083281 | 10617.5 |
| duf4160 domain-containing protein | SLIN_RS24480 | Not Available | - | 6083361 - 6083558 | 7935.68 |
| peptide chain release factor 1 | SLIN_RS24485 | Q11NS4 | + | 6083775 - 6084848 | 40488.1 |
| arylsulfatase | SLIN_RS24490 | Q8A2H2 | - | 6084962 - 6086482 | 55331.0 |
| gfo/idh/moca family protein | SLIN_RS24495 | P49305 | - | 6086580 - 6087899 | 49282.8 |
| c-type cytochrome | SLIN_RS24500 | Not Available | - | 6088024 - 6090312 | 84542.6 |
| ceramidase domain-containing protein | SLIN_RS24505 | Not Available | - | 6090330 - 6091151 | 30823.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)