Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | SLIN_RS24410 | Not Available | - | 6070220 - 6071008 | 28615.4 |
| rna polymerase sigma factor | SLIN_RS24415 | Not Available | - | 6071325 - 6071906 | 22437.8 |
| fatty acid desaturase | SLIN_RS24420 | Q6H5U3 | - | 6072182 - 6073213 | 39574.3 |
| porin family protein | SLIN_RS24425 | Not Available | - | 6073571 - 6074263 | 24641.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SLIN_RS24430 | Not Available | + | 6074545 - 6075348 | 30324.9 |
| inorganic phosphate transporter | SLIN_RS24435 | P0AFJ9 | - | 6075435 - 6076856 | 51088.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | SLIN_RS24440 | Q11QF0 | - | 6077081 - 6078130 | 39373.1 |
| carboxypeptidase-like regulatory domain-containing protein | SLIN_RS24445 | Not Available | - | 6078174 - 6079064 | 33597.3 |
| cvpa family protein | SLIN_RS24450 | Not Available | - | 6079160 - 6079684 | 19575.7 |
| gatb/yqey domain-containing protein | SLIN_RS24455 | P54464 | - | 6079782 - 6080231 | 16392.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)