Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | SLIN_RS24360 | Q11NZ7 | - | 6055238 - 6056524 | 46433.5 |
| arac family transcriptional regulator | SLIN_RS24365 | Not Available | - | 6056658 - 6057530 | 33165.7 |
| phytanoyl-coa dioxygenase family protein | SLIN_RS24370 | Not Available | + | 6057670 - 6058503 | 31752.8 |
| cytochrome c biogenesis protein ccda | SLIN_RS24375 | Not Available | + | 6058636 - 6060735 | 75752.4 |
| low molecular weight protein tyrosine phosphatase family protein | SLIN_RS24380 | Not Available | + | 6060996 - 6061313 | 12182.7 |
| lipase family protein | SLIN_RS24385 | Not Available | - | 6061330 - 6062535 | 44350.7 |
| endonuclease/exonuclease/phosphatase family protein | SLIN_RS24390 | Not Available | - | 6062668 - 6063468 | 29184.3 |
| metallophosphoesterase | SLIN_RS24395 | Not Available | - | 6063565 - 6064788 | 46209.9 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS24400 | Not Available | - | 6064862 - 6066592 | 65077.4 |
| tonb-dependent receptor | SLIN_RS24405 | Not Available | - | 6066617 - 6070183 | 131260.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)