Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | SLIN_RS00470 | Not Available | + | 111967 - 113388 | 51905.1 |
| phosphatase | SLIN_RS00475 | C6DHF6 | - | 113479 - 114399 | 34149.2 |
| 30s ribosomal protein s21 | SLIN_RS00480 | Q11PN0 | + | 114457 - 114654 | 7768.58 |
| tyrosine-type recombinase/integrase | SLIN_RS00485 | Q8KBZ5 | + | 115041 - 115937 | 34130.5 |
| atp-binding protein | SLIN_RS00490 | Not Available | + | 116280 - 118520 | 84556.5 |
| response regulator | SLIN_RS00495 | G7WMP8 | + | 118526 - 118951 | 16155.4 |
| atp-binding protein | SLIN_RS00500 | Not Available | + | 120483 - 122162 | 63739.3 |
| photoactive yellow protein | SLIN_RS00505 | Not Available | + | 122200 - 122571 | 14205.9 |
| phosphopantetheine-binding protein | SLIN_RS00510 | O69140 | + | 122568 - 123671 | 40464.8 |
| rna polymerase sigma-70 factor | SLIN_RS00515 | Not Available | + | 123953 - 124576 | 24252.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)