Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | SLIN_RS00415 | B2I0J2 | - | 99936 - 101099 | 42713.0 |
| sdr family nad(p)-dependent oxidoreductase | SLIN_RS00420 | P69935 | + | 101321 - 102073 | 26609.7 |
| sdr family oxidoreductase | SLIN_RS00425 | Not Available | + | 102134 - 102952 | 29417.7 |
| hypothetical protein | SLIN_RS00430 | Not Available | + | 102985 - 103866 | 34482.5 |
| sugar phosphate isomerase/epimerase | SLIN_RS00435 | Not Available | - | 103992 - 105017 | 38228.6 |
| alpha/beta hydrolase | SLIN_RS00440 | Not Available | - | 105221 - 105892 | 25940.7 |
| duf4442 domain-containing protein | SLIN_RS00445 | Not Available | - | 105899 - 106429 | 21112.2 |
| dinb family protein | SLIN_RS00450 | Not Available | - | 106463 - 106924 | 17030.3 |
| marr family winged helix-turn-helix transcriptional regulator | SLIN_RS00455 | Not Available | - | 106991 - 107434 | 16500.0 |
| bile acid:sodium symporter family protein | SLIN_RS00460 | Q8ZKL0 | - | 107529 - 108533 | 35580.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)