Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpb | SLIN_RS00315 | Q9RZP0 | + | 80121 - 82280 | 76433.2 |
| k(+)-transporting atpase subunit c | SLIN_RS00320 | A6H084 | + | 82362 - 82919 | 19593.8 |
| porin | SLIN_RS00325 | Not Available | + | 83020 - 84135 | 40960.5 |
| sensor protein kdpd | SLIN_RS00330 | P73870 | + | 84266 - 85390 | 42293.3 |
| atp-binding protein | SLIN_RS00335 | Q9RDT3 | + | 85393 - 87207 | 67283.5 |
| thua domain-containing protein | SLIN_RS00340 | Not Available | + | 87249 - 88082 | 31944.8 |
| 3-hydroxyacyl-coa dehydrogenase family protein | SLIN_RS00345 | Q988C8 | + | 88095 - 89051 | 34329.8 |
| hypothetical protein | SLIN_RS00350 | Not Available | + | 89185 - 89463 | 10543.4 |
| rna polymerase sigma factor | SLIN_RS00355 | Not Available | + | 89460 - 89924 | 18070.5 |
| hypothetical protein | SLIN_RS00360 | Not Available | + | 89915 - 90523 | 22709.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)