Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| slatt domain-containing protein | SLIN_RS00265 | Not Available | - | 66635 - 67147 | 20404.8 |
| hypothetical protein | SLIN_RS00270 | Not Available | - | 67144 - 68028 | 33674.8 |
| hepn domain-containing protein | SLIN_RS00275 | Not Available | - | 68211 - 68684 | 18223.0 |
| duf262 domain-containing protein | SLIN_RS00280 | Not Available | - | 68684 - 69709 | 40343.1 |
| glycoside hydrolase family 97 protein | SLIN_RS00285 | G8JZS4 | - | 69864 - 71945 | 78480.3 |
| sigma-54 dependent transcriptional regulator | SLIN_RS00290 | Q06065 | + | 72173 - 73513 | 49673.6 |
| pyridoxal-dependent decarboxylase | SLIN_RS00295 | P54769 | - | 73770 - 75167 | 50997.9 |
| kup/hak/kt family potassium transporter | SLIN_RS00300 | Not Available | + | 75252 - 77219 | 73409.9 |
| potassium-transporting atpase subunit kdpa | SLIN_RS00305 | A5FIF9 | + | 77707 - 79428 | 61633.9 |
| hypothetical protein | SLIN_RS00310 | Not Available | - | 79772 - 80101 | 13028.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)