Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | SLIN_RS00215 | Q11NV4 | - | 54189 - 57635 | 130236.0 |
| rpn family recombination-promoting nuclease/putative transposase | SLIN_RS00220 | P31665 | - | 57815 - 58840 | 39660.5 |
| ompa family protein | SLIN_RS00225 | Not Available | - | 58840 - 60192 | 49423.9 |
| gfo/idh/moca family protein | SLIN_RS00230 | Not Available | + | 60393 - 61808 | 52183.4 |
| putative oxidoreductase c-terminal domain-containing protein | SLIN_RS00235 | Not Available | + | 61969 - 63366 | 52128.4 |
| gfo/idh/moca family protein | SLIN_RS00240 | Not Available | + | 63469 - 64644 | 43126.1 |
| hypothetical protein | SLIN_RS00245 | Not Available | - | 64815 - 65309 | 19070.9 |
| duf3368 domain-containing protein | SLIN_RS00250 | Not Available | - | 65514 - 65969 | 16280.9 |
| upf0175 family protein | SLIN_RS00255 | Not Available | - | 65941 - 66189 | 9310.07 |
| hypothetical protein | SLIN_RS00260 | Not Available | + | 66233 - 66418 | 6977.48 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)