Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | SLIN_RS00165 | Not Available | - | 40076 - 41143 | 40303.0 |
| dna helicase recq | SLIN_RS00170 | Not Available | - | 41332 - 43455 | 79640.9 |
| hypothetical protein | SLIN_RS00175 | Not Available | + | 43666 - 44238 | 19548.4 |
| hypothetical protein | SLIN_RS00180 | Not Available | - | 44372 - 44893 | 19333.8 |
| penicillin acylase family protein | SLIN_RS00185 | P06875 | + | 45015 - 47438 | 90729.6 |
| arginine--trna ligase | SLIN_RS00190 | Q8A3X5 | + | 47569 - 49368 | 66715.5 |
| glutathione peroxidase | SLIN_RS00195 | Q8CSR9 | + | 49436 - 50056 | 22708.3 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | SLIN_RS00200 | P32166 | + | 50157 - 51050 | 32182.9 |
| metallophosphoesterase | SLIN_RS00205 | Not Available | - | 51177 - 53501 | 84459.6 |
| hypothetical protein | SLIN_RS00210 | Not Available | - | 53593 - 53937 | 13392.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)