Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | SLIN_RS00065 | Q11T61 | - | 12840 - 13940 | 40101.2 |
| amidohydrolase family protein | SLIN_RS00070 | Not Available | - | 14015 - 15139 | 43146.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SLIN_RS00075 | Q11Q93 | - | 15164 - 15643 | 17307.0 |
| hepn domain-containing protein | SLIN_RS00080 | Not Available | - | 15640 - 16032 | 15008.6 |
| nucleotidyltransferase domain-containing protein | SLIN_RS00085 | Not Available | - | 16029 - 16382 | 13265.8 |
| pitrilysin family protein | SLIN_RS00090 | P55679 | - | 16399 - 17640 | 46523.1 |
| hypothetical protein | SLIN_RS00095 | Not Available | + | 17745 - 18857 | 41769.4 |
| tonb-dependent receptor | SLIN_RS00100 | Not Available | + | 19274 - 22204 | 104979.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS00105 | Not Available | + | 22262 - 23938 | 62506.9 |
| dna polymerase iii subunit gamma/tau | SLIN_RS00110 | P09122 | - | 24042 - 26036 | 73512.5 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)