Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SLIN_RS34285 | Not Available | + | 10209 - 10505 | 11053.2 |
| is3 family transposase | SLIN_RS34290 | Not Available | + | 10526 - 10897 | 14321.4 |
| group ii intron reverse transcriptase/maturase | SLIN_RS34295 | P0A3U0 | + | 11499 - 13022 | 59499.2 |
| is3 family transposase | SLIN_RS34300 | Not Available | + | 13081 - 13545 | 18207.8 |
| cor domain-containing protein | SLIN_RS34305 | Q55E58 | + | 14085 - 16862 | 106635.0 |
| duf5677 domain-containing protein | SLIN_RS34310 | Not Available | - | 17166 - 17750 | 21981.0 |
| duf4238 domain-containing protein | SLIN_RS34315 | Not Available | - | 18391 - 19035 | 24870.0 |
| is5 family transposase | SLIN_RS34320 | Not Available | - | 19032 - 19811 | 30762.0 |
| duf4238 domain-containing protein | SLIN_RS34325 | Not Available | - | 19889 - 20347 | 17817.5 |
| hypothetical protein | SLIN_RS34330 | Not Available | - | 20758 - 20991 | 8320.83 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)