Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | SLIN_RS34165 | P9WLM8 | - | 133160 - 134338 | 43939.3 |
| eama family transporter | SLIN_RS34170 | P29939 | - | 134419 - 134832 | 14739.6 |
| duf305 domain-containing protein | SLIN_RS34175 | Not Available | - | 134841 - 135296 | 17428.8 |
| hamp domain-containing sensor histidine kinase | SLIN_RS34180 | Not Available | - | 135420 - 136676 | 47547.6 |
| response regulator transcription factor | SLIN_RS34185 | A6WZ81 | - | 136673 - 137353 | 25576.8 |
| aquaporin | SLIN_RS34190 | G5CTG2 | + | 137608 - 138270 | 23279.7 |
| hypothetical protein | SLIN_RS34195 | Not Available | - | 138632 - 138991 | 13353.8 |
| phosphopyruvate hydratase | SLIN_RS34200 | Q8KB35 | - | 139066 - 140349 | 46664.2 |
| universal stress protein | SLIN_RS34205 | Not Available | - | 140390 - 140833 | 15729.9 |
| duf190 domain-containing protein | SLIN_RS34210 | Not Available | - | 140845 - 141240 | 14848.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)