Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4932 domain-containing protein | SLIN_RS33400 | Not Available | - | 167521 - 168648 | 43298.6 |
| transposase | SLIN_RS33405 | Not Available | - | 169647 - 170645 | 38773.0 |
| sialidase family protein | SLIN_RS33410 | Not Available | + | 170732 - 171790 | 37961.3 |
| four-helix bundle copper-binding protein | SLIN_RS33415 | Not Available | - | 171852 - 172220 | 13152.9 |
| hyc_cc_pp family protein | SLIN_RS33420 | Not Available | + | 172400 - 172846 | 16535.2 |
| ynce family protein | SLIN_RS33425 | Not Available | + | 173073 - 174164 | 38085.5 |
| duf2911 domain-containing protein | SLIN_RS33430 | Not Available | + | 174173 - 175036 | 31536.6 |
| class i sam-dependent methyltransferase | SLIN_RS33435 | Not Available | + | 175040 - 175699 | 24518.9 |
| 5-fold beta-flower protein | SLIN_RS33440 | Not Available | + | 175720 - 176163 | 15738.3 |
| duf2231 domain-containing protein | SLIN_RS33445 | Not Available | + | 176438 - 176950 | 18029.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)