Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mgtc/sapb family protein | SLIN_RS34470 | P0AFV3 | - | 8240 - 8662 | 14386.1 |
| duf2490 domain-containing protein | SLIN_RS34475 | Not Available | + | 8730 - 9536 | 32239.7 |
| sgnh/gdsl hydrolase family protein | SLIN_RS34655 | Not Available | - | 128 - 811 | 24356.5 |
| hypothetical protein | SLIN_RS34660 | Not Available | - | 1062 - 1439 | 14114.2 |
| hypothetical protein | SLIN_RS34665 | Not Available | - | 1657 - 1962 | 11210.1 |
| helix-turn-helix domain-containing protein | SLIN_RS34670 | Not Available | + | 2048 - 2548 | 19113.8 |
| replication initiation protein | SLIN_RS34675 | Not Available | - | 2567 - 3493 | 35452.9 |
| plasmid mobilization protein | SLIN_RS34680 | Not Available | + | 4241 - 4522 | 10542.7 |
| relaxase/mobilization nuclease domain-containing protein | SLIN_RS34685 | Not Available | + | 4519 - 5466 | 35584.0 |
| hypothetical protein | SLIN_RS34690 | Not Available | + | 5463 - 6035 | 21844.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)