Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3291 domain-containing protein | SLIN_RS07905 | Not Available | - | 1938484 - 1938957 | 17982.5 |
| fur family transcriptional regulator | SLIN_RS07910 | A8FKI7 | - | 1939037 - 1939561 | 20458.5 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SLIN_RS07915 | O67012 | - | 1939645 - 1941921 | 86559.2 |
| Trna-leu | Not Available | Not Available | + | 1942143 - 1942224 | Not Available |
| trigger factor | SLIN_RS07925 | Q5NNZ0 | + | 1942336 - 1943682 | 50863.5 |
| hypothetical protein | SLIN_RS07930 | Not Available | - | 1943936 - 1944799 | 32087.3 |
| l-threonylcarbamoyladenylate synthase | SLIN_RS07935 | Q0VTD8 | - | 1945077 - 1945697 | 23009.7 |
| glycosyltransferase | SLIN_RS07940 | Q68X33 | - | 1945781 - 1946776 | 37964.5 |
| yihy/virulence factor brkb family protein | SLIN_RS07945 | O34437 | - | 1947074 - 1948030 | 35733.2 |
| thioesterase family protein | SLIN_RS07950 | Not Available | - | 1948069 - 1948479 | 15718.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)