Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yitt family protein | SLIN_RS07800 | P54478 | - | 1917088 - 1917957 | 31054.8 |
| cysteine synthase a | SLIN_RS07805 | Q59447 | - | 1918078 - 1918986 | 32434.2 |
| serine o-acetyltransferase epsc | SLIN_RS07810 | Q59967 | - | 1918996 - 1919841 | 31448.9 |
| sorbosone dehydrogenase family protein | SLIN_RS07815 | Q9D2G9 | + | 1920042 - 1921286 | 44678.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | SLIN_RS07820 | Q8TI34 | + | 1921382 - 1921873 | 17406.8 |
| mbl fold metallo-hydrolase | SLIN_RS07825 | Q769K2 | + | 1921907 - 1922947 | 38530.5 |
| start domain-containing protein | SLIN_RS07830 | Not Available | + | 1923037 - 1923705 | 25099.4 |
| uma2 family endonuclease | SLIN_RS07840 | Not Available | + | 1924366 - 1924950 | 22291.6 |
| redoxin family protein | SLIN_RS07845 | Not Available | - | 1924952 - 1926841 | 70098.4 |
| sodium:solute symporter | SLIN_RS07850 | Q5E733 | - | 1926934 - 1928397 | 54146.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)