Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SLIN_RS07700 | Not Available | - | 1885061 - 1887403 | 84838.2 |
| hypothetical protein | SLIN_RS07705 | Not Available | - | 1887564 - 1888103 | 20716.9 |
| vps10 domain-containing protein | SLIN_RS07710 | Not Available | - | 1888211 - 1891291 | 114241.0 |
| vps10 domain-containing protein | SLIN_RS07715 | Not Available | - | 1891543 - 1894608 | 113396.0 |
| tonb-dependent receptor domain-containing protein | SLIN_RS07720 | Q7MYE3 | + | 1895201 - 1897357 | 79831.6 |
| vps10 domain-containing protein | SLIN_RS07725 | Q3MUH7 | + | 1897440 - 1900676 | 118454.0 |
| pepsy domain-containing protein | SLIN_RS07730 | Not Available | + | 1900883 - 1901938 | 39086.9 |
| vps10 domain-containing protein | SLIN_RS07735 | Q7Z9M8 | + | 1902062 - 1905061 | 109893.0 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | SLIN_RS07740 | Q5LAX0 | - | 1905303 - 1906190 | 31890.0 |
| hnh endonuclease | SLIN_RS07745 | Not Available | - | 1906449 - 1906640 | 7509.92 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)