Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | SLIN_RS07550 | Q59092 | - | 1854598 - 1855914 | 47705.7 |
| protocatechuate 3,4-dioxygenase subunit alpha | SLIN_RS07555 | P15109 | - | 1855930 - 1856451 | 19354.9 |
| protocatechuate 3,4-dioxygenase subunit beta | SLIN_RS07560 | P15110 | - | 1856463 - 1857170 | 26660.7 |
| helix-turn-helix domain-containing protein | SLIN_RS07565 | Not Available | + | 1857314 - 1858195 | 33797.8 |
| hypothetical protein | SLIN_RS07570 | Not Available | + | 1858310 - 1858885 | 20793.1 |
| res family nad+ phosphorylase | SLIN_RS07575 | Not Available | + | 1858909 - 1859385 | 17731.4 |
| fad-dependent oxidoreductase | SLIN_RS07580 | O06489 | - | 1859477 - 1860601 | 41156.7 |
| cyclase family protein | SLIN_RS07585 | Not Available | - | 1860631 - 1861398 | 28498.9 |
| fumarylacetoacetate hydrolase family protein | SLIN_RS07590 | Q8RW90 | - | 1861450 - 1862358 | 33504.1 |
| element excision factor xish family protein | SLIN_RS07595 | Not Available | + | 1862441 - 1862857 | 15865.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)