Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4833 domain-containing protein | SLIN_RS07500 | Q8A7K1 | + | 1840307 - 1841593 | 48127.4 |
| phosphatase pap2 family protein | SLIN_RS07505 | Q8A7K2 | + | 1841624 - 1842559 | 35460.9 |
| duf2723 domain-containing protein | SLIN_RS07510 | Not Available | - | 1842770 - 1845724 | 111353.0 |
| carboxylesterase family protein | SLIN_RS07515 | D2D3B6 | - | 1845937 - 1847490 | 55888.6 |
| alpha/beta hydrolase family protein | SLIN_RS07520 | Not Available | - | 1847584 - 1848471 | 33120.9 |
| alpha/beta hydrolase | SLIN_RS07525 | Not Available | - | 1848537 - 1849490 | 34160.0 |
| 3-oxoadipyl-coa thiolase | SLIN_RS07530 | P0C7L2 | - | 1849519 - 1850724 | 42382.1 |
| 3-oxoacid coa-transferase subunit b | SLIN_RS07535 | P42316 | - | 1850839 - 1851462 | 21324.0 |
| 4-hydroxybenzoate 3-monooxygenase | SLIN_RS07540 | C4TP09 | - | 1852179 - 1853396 | 44970.7 |
| 3-oxoadipate enol-lactonase | SLIN_RS07545 | P00632 | - | 1853393 - 1854514 | 41537.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)