Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | SLIN_RS33245 | Q60048 | + | 141601 - 144153 | 89959.3 |
| hypothetical protein | SLIN_RS33250 | Not Available | + | 144150 - 144485 | 12779.0 |
| hypothetical protein | SLIN_RS33255 | Not Available | + | 144487 - 144846 | 13256.9 |
| zip family metal transporter | SLIN_RS33260 | Not Available | + | 144856 - 145605 | 25840.5 |
| stas/sec14 domain-containing protein | SLIN_RS33265 | Not Available | + | 145636 - 146022 | 14921.0 |
| low affinity iron permease family protein | SLIN_RS33270 | Not Available | + | 146035 - 146502 | 17196.4 |
| hypothetical protein | SLIN_RS33275 | Not Available | + | 146557 - 147150 | 21667.5 |
| duf1345 domain-containing protein | SLIN_RS33280 | Not Available | + | 147163 - 147816 | 23737.2 |
| d-sedoheptulose 7-phosphate isomerase | SLIN_RS33285 | A6T518 | + | 147843 - 148484 | 22804.3 |
| cation diffusion facilitator family transporter | SLIN_RS33290 | P94178 | + | 148481 - 149398 | 33053.5 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)