Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aspartate aminotransferase family protein | SLIN_RS07400 | P66876 | - | 1820317 - 1821438 | 40362.2 |
| crotonase/enoyl-coa hydratase family protein | SLIN_RS07405 | Q54SS0 | + | 1821713 - 1822552 | 30717.9 |
| sdr family oxidoreductase | SLIN_RS07410 | Q16698 | + | 1822663 - 1823532 | 31275.5 |
| duf4494 domain-containing protein | SLIN_RS07415 | Not Available | + | 1823680 - 1824198 | 19772.2 |
| hyc_cc_pp family protein | SLIN_RS07420 | Not Available | + | 1824313 - 1824762 | 16377.2 |
| tonb-dependent receptor | SLIN_RS07425 | Not Available | + | 1824841 - 1827159 | 86214.2 |
| arac family transcriptional regulator | SLIN_RS07430 | Not Available | + | 1827159 - 1827725 | 21729.2 |
| four-helix bundle copper-binding protein | SLIN_RS07435 | Not Available | + | 1827876 - 1828232 | 12919.2 |
| hypothetical protein | SLIN_RS07440 | Not Available | + | 1828321 - 1829364 | 37388.7 |
| hypothetical protein | SLIN_RS07445 | Not Available | + | 1829384 - 1830793 | 52090.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)