Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS07100 | Not Available | - | 1757544 - 1757741 | 7711.13 |
| cytochrome c maturation protein ccme | SLIN_RS07105 | Not Available | - | 1757738 - 1758178 | 16248.5 |
| ccmd family protein | SLIN_RS07110 | Not Available | - | 1758236 - 1758451 | 7992.01 |
| cytochrome c biogenesis protein ccsa | SLIN_RS07115 | Not Available | - | 1758558 - 1759217 | 25096.2 |
| heme exporter protein ccmb | SLIN_RS07120 | Not Available | - | 1759305 - 1759979 | 24989.4 |
| tsup family transporter | SLIN_RS07125 | P29942 | + | 1760233 - 1760997 | 27616.6 |
| feoa family protein | SLIN_RS07130 | Not Available | + | 1761076 - 1761303 | 8066.01 |
| ferrous iron transport protein b | SLIN_RS07135 | Q5XPH7 | + | 1761361 - 1763478 | 77879.5 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | SLIN_RS07140 | B5YIM0 | - | 1763873 - 1765378 | 55016.6 |
| 50s ribosomal protein l19 | SLIN_RS07145 | B3ESU3 | + | 1765493 - 1765867 | 13964.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)