Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 43 protein | SLIN_RS07000 | P45982 | - | 1731366 - 1733042 | 62781.4 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS07005 | Not Available | - | 1733146 - 1734960 | 65895.4 |
| tonb-dependent receptor | SLIN_RS07010 | Not Available | - | 1734975 - 1738481 | 126879.0 |
| fecr family protein | SLIN_RS07015 | Not Available | - | 1738679 - 1739764 | 40733.5 |
| rna polymerase sigma factor | SLIN_RS07020 | Not Available | - | 1739823 - 1740428 | 23682.7 |
| hsp70 family protein | SLIN_RS07025 | P36928 | - | 1741138 - 1742424 | 47111.2 |
| outer membrane beta-barrel protein | SLIN_RS07030 | Not Available | - | 1742576 - 1743247 | 24921.1 |
| hypothetical protein | SLIN_RS07035 | Not Available | + | 1743348 - 1744280 | 33320.6 |
| sulfatase | SLIN_RS07040 | Q89YS5 | + | 1744502 - 1746070 | 60013.4 |
| formylglycine-generating enzyme family protein | SLIN_RS07045 | I6Y8I5 | + | 1746075 - 1747151 | 38824.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)