Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SLIN_RS33190 | Not Available | + | 127318 - 128241 | 35810.6 |
| type ii toxin-antitoxin system higb family toxin | SLIN_RS33195 | Not Available | + | 128823 - 129155 | 12790.3 |
| type ii toxin-antitoxin system higa family antitoxin | SLIN_RS33200 | Not Available | + | 129157 - 129603 | 17052.3 |
| duf5700 domain-containing putative zn-dependent protease | SLIN_RS33205 | Not Available | - | 129791 - 130903 | 41379.5 |
| helix-turn-helix domain-containing protein | SLIN_RS33210 | Not Available | - | 131048 - 131389 | 13527.3 |
| transposase | SLIN_RS33215 | Not Available | + | 131513 - 131824 | 12214.8 |
| is3 family transposase | SLIN_RS33220 | Not Available | + | 132013 - 132717 | 28234.8 |
| isl3 family transposase | SLIN_RS33225 | Not Available | + | 133261 - 134766 | 56996.1 |
| cusa/czca family heavy metal efflux rnd transporter | SLIN_RS33235 | P94177 | + | 135825 - 140234 | 159953.0 |
| efflux rnd transporter periplasmic adaptor subunit | SLIN_RS33240 | Not Available | + | 140242 - 141516 | 45794.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)