Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | SLIN_RS06850 | Not Available | + | 1691171 - 1692091 | 33435.4 |
| acyl-coa dehydrogenase family protein | SLIN_RS06855 | P96831 | + | 1692186 - 1693460 | 47200.7 |
| phosphotransferase | SLIN_RS06860 | Not Available | + | 1693468 - 1694541 | 40097.9 |
| l-threonylcarbamoyladenylate synthase | SLIN_RS06865 | P39153 | - | 1694519 - 1695493 | 34478.5 |
| peptidylprolyl isomerase | SLIN_RS06870 | Q9KNX6 | - | 1695606 - 1696073 | 16737.5 |
| fad-dependent oxidoreductase | SLIN_RS06875 | M1W428 | - | 1696315 - 1697262 | 34196.8 |
| t9ss c-terminal target domain-containing protein | SLIN_RS06880 | Not Available | + | 1698050 - 1700332 | 82840.9 |
| fasciclin domain-containing protein | SLIN_RS06885 | Not Available | + | 1700475 - 1701053 | 20127.0 |
| l,d-transpeptidase family protein | SLIN_RS06890 | Not Available | + | 1701271 - 1702482 | 46007.3 |
| murein l,d-transpeptidase catalytic domain family protein | SLIN_RS06895 | Not Available | - | 1702452 - 1703174 | 26518.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)