Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine ammonia-lyase subunit eutc | SLIN_RS06800 | Q8P8I0 | + | 1680446 - 1681234 | 28676.8 |
| smr/muts family protein | SLIN_RS06805 | Not Available | + | 1681381 - 1682403 | 37842.5 |
| duf4403 family protein | SLIN_RS06810 | Not Available | + | 1682588 - 1683880 | 48502.4 |
| 30s ribosomal protein s16 | SLIN_RS06815 | Q11YV6 | + | 1684632 - 1685192 | 20404.1 |
| ribosome maturation factor rimm | SLIN_RS06820 | A0M5T0 | + | 1685319 - 1685912 | 21866.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | SLIN_RS06825 | Q11YV4 | + | 1685902 - 1686579 | 25530.6 |
| hypothetical protein | SLIN_RS06830 | Not Available | - | 1686715 - 1687083 | 13426.4 |
| transglycosylase domain-containing protein | SLIN_RS06835 | B2JH09 | - | 1687094 - 1689373 | 84937.0 |
| gnat family n-acetyltransferase | SLIN_RS06840 | Q7PCJ9 | - | 1689529 - 1689981 | 17081.5 |
| rlua family pseudouridine synthase | SLIN_RS06845 | O50310 | - | 1690049 - 1691095 | 39614.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)