Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | SLIN_RS06750 | P37571 | + | 1663307 - 1665838 | 93997.4 |
| gmc oxidoreductase | SLIN_RS06755 | Not Available | - | 1665931 - 1667685 | 63880.2 |
| phosphatidylinositol-specific phospholipase c/glycerophosphodiester phosphodiesterase family protein | SLIN_RS06760 | Q75E59 | - | 1667775 - 1668533 | 28982.5 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SLIN_RS06765 | P51831 | + | 1668732 - 1669478 | 26534.0 |
| hypothetical protein | SLIN_RS06770 | Not Available | + | 1669537 - 1671660 | 78632.4 |
| helix-turn-helix domain-containing protein | SLIN_RS06775 | Q7ZV90 | - | 1671869 - 1674358 | 92749.0 |
| eama family transporter | SLIN_RS06780 | Not Available | - | 1674440 - 1674862 | 14803.8 |
| phosphocholine-specific phospholipase c | SLIN_RS06785 | P15713 | + | 1675068 - 1677584 | 94851.2 |
| ethanolamine permease | SLIN_RS06790 | O87394 | + | 1677703 - 1679040 | 48395.6 |
| ethanolamine ammonia-lyase subunit eutb | SLIN_RS06795 | P0AEJ7 | + | 1679061 - 1680440 | 50022.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)