Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SLIN_RS06400 | Not Available | - | 1596103 - 1596522 | 15720.3 |
| sco family protein | SLIN_RS06405 | P54178 | - | 1596519 - 1597190 | 24668.5 |
| hypothetical protein | SLIN_RS06410 | Not Available | - | 1597156 - 1597611 | 17183.4 |
| dna repair protein recn | SLIN_RS06415 | P17894 | - | 1597659 - 1599395 | 65043.6 |
| duf4835 family protein | SLIN_RS06420 | Not Available | - | 1599400 - 1600305 | 34369.8 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | SLIN_RS06425 | A0A2I9 | - | 1600324 - 1601562 | 44570.7 |
| dna-directed rna polymerase subunit omega | SLIN_RS06430 | Not Available | - | 1601719 - 1602030 | 11924.9 |
| outer membrane protein assembly factor bamd | SLIN_RS06435 | Not Available | - | 1602117 - 1603016 | 34748.9 |
| t9ss type a sorting domain-containing protein | SLIN_RS06440 | Not Available | - | 1603141 - 1603794 | 23884.7 |
| osta-like protein | SLIN_RS06445 | Not Available | - | 1603890 - 1605734 | 68458.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)