Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SLIN_RS06350 | Not Available | + | 1585941 - 1586246 | 11584.7 |
| hypothetical protein | SLIN_RS06355 | Not Available | - | 1586341 - 1587051 | 27596.1 |
| response regulator transcription factor | SLIN_RS06360 | A0QBQ9 | - | 1587150 - 1587830 | 25750.1 |
| tolc family protein | SLIN_RS06365 | Not Available | + | 1588065 - 1589393 | 49953.8 |
| sterol desaturase family protein | SLIN_RS06370 | P68434 | - | 1589457 - 1590353 | 34673.7 |
| transcription termination factor rho | SLIN_RS06375 | O83281 | - | 1590490 - 1592742 | 83383.0 |
| hypothetical protein | SLIN_RS06380 | Not Available | + | 1592922 - 1593140 | 8183.07 |
| type iii pantothenate kinase | SLIN_RS06385 | Q11Q02 | + | 1593302 - 1594069 | 27922.8 |
| hypothetical protein | SLIN_RS06390 | Not Available | + | 1594098 - 1595330 | 44683.1 |
| lps export abc transporter periplasmic protein lptc | SLIN_RS06395 | Not Available | + | 1595563 - 1596063 | 18946.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)