Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | SLIN_RS06300 | Q8R9T6 | - | 1572889 - 1574178 | 47211.2 |
| serine/threonine-protein kinase | SLIN_RS06305 | P54739 | - | 1574189 - 1575742 | 56739.7 |
| pp2c family serine/threonine-protein phosphatase | SLIN_RS06310 | Q8KY51 | - | 1575742 - 1577190 | 52347.5 |
| fha domain-containing protein | SLIN_RS06315 | Not Available | - | 1577350 - 1578363 | 37552.5 |
| family 20 glycosylhydrolase | SLIN_RS06320 | Q54468 | - | 1578696 - 1581254 | 94206.1 |
| response regulator | SLIN_RS06325 | Not Available | - | 1581464 - 1581913 | 16880.3 |
| lyttr family dna-binding domain-containing protein | SLIN_RS06330 | P94514 | - | 1582481 - 1583209 | 27677.4 |
| hypothetical protein | SLIN_RS06335 | Not Available | - | 1583700 - 1583882 | 7339.91 |
| rna polymerase sigma factor | SLIN_RS06340 | Not Available | + | 1584105 - 1584656 | 21363.8 |
| yafy family protein | SLIN_RS06345 | O34920 | - | 1584896 - 1585843 | 36798.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)