Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | SLIN_RS06250 | Q5A599 | + | 1555225 - 1556442 | 45712.2 |
| response regulator | SLIN_RS06255 | Not Available | + | 1556420 - 1557472 | 39120.7 |
| dna polymerase iv | SLIN_RS06260 | Q98NW7 | + | 1557606 - 1558685 | 40089.3 |
| hypothetical protein | SLIN_RS06265 | Not Available | + | 1559549 - 1559920 | 13126.4 |
| tonb-dependent receptor | SLIN_RS06270 | Not Available | + | 1560257 - 1563457 | 115945.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS06275 | T2KN63 | + | 1563466 - 1564848 | 50559.9 |
| antibiotic biosynthesis monooxygenase | SLIN_RS06280 | Not Available | + | 1565039 - 1565416 | 14212.7 |
| m13 family metallopeptidase | SLIN_RS06285 | Not Available | + | 1565560 - 1567602 | 76099.3 |
| fha domain-containing protein | SLIN_RS06290 | Not Available | - | 1567681 - 1568559 | 32195.0 |
| ftsw/roda/spove family cell cycle protein | SLIN_RS06295 | Q50186 | - | 1568885 - 1572856 | 145624.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)