Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribulokinase | SLIN_RS06100 | A4W6G7 | - | 1512175 - 1513809 | 58736.9 |
| nrtr dna-binding winged helix domain-containing protein | SLIN_RS06105 | Not Available | - | 1514011 - 1514712 | 26980.5 |
| alpha/beta hydrolase | SLIN_RS06110 | Not Available | - | 1514887 - 1515873 | 35769.6 |
| rhamnogalacturonan acetylesterase | SLIN_RS06115 | O31523 | - | 1515905 - 1516660 | 28442.0 |
| class 1 fructose-bisphosphatase | SLIN_RS06120 | B7VKW7 | - | 1516775 - 1517776 | 36176.3 |
| mfs transporter | SLIN_RS06125 | Not Available | - | 1517895 - 1519214 | 48364.3 |
| ketohydroxyglutarate aldolase | SLIN_RS06130 | Not Available | - | 1519211 - 1519879 | 23460.3 |
| sugar kinase | SLIN_RS06135 | Q53W83 | - | 1519887 - 1520915 | 37177.2 |
| tagaturonate reductase | SLIN_RS06140 | Q9KFI7 | - | 1521245 - 1522822 | 57874.3 |
| laci family dna-binding transcriptional regulator | SLIN_RS06145 | P0ACN9 | + | 1523116 - 1524120 | 37138.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)